Forecasting SARS-CoV-2 Concentrations in Wastewater
A project on forecasting SARS-CoV-2 concentrations in wastewater at State College.
Data Used: NWSS Public SARS-CoV-2 Wastewater Metric Data
Provided By: National Wastewater Surveillance System
Tools Used:
- Time Series Analysis: Statsmodel, Facebook Prophet (Forecasting at Scale)
- Machine Learning Development and Packaging: mlflow
- Containerization: Docker
- Continuous Integration/ Continuous Development(CI/CD): Jenkins
Results:
- Data Plot: Plot of SARS-CoV-2 concentrations in wastewater across two years
- Timeseries Decomposition: Season-Trend decomposition of the timeseries data
- Train Test Split: Splitting the data for training and testing
- Prophet Forecast: Prophet forecast with actual observations, changepoints and comparison with naive forecast
- Model Components: Time series components learnt by Prophet Model